Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGIKIATIGGGS-SYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGV---VGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAET----LGVDV---SEIYVEFVGLNHMVFAKTVYHNGKDVTKDVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKVEAELFEL----YKQEELAEKPKQLE-----QRGGA--YYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTP-SESVAREMLDELLEAHKEYLPNFFK |
| 3FEF Chain:A ((6-436)) | ----IKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAA-QKNEVIGNHSGNGRWR----YEAVSTLKK--ALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVG-DTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYRHIDLLP--IFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGD---RHLAEF-LPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETERLIVQQRGVAEKASGEEGVNIIAALLGLGELVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILSGALPKGVEMLAARHISNQEAVADAGLTKDTGLAFQAFLNDPLVQIDRSDAEQLFNDML------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123875 for 3596 contacts (-34.4/contact) +
2D Compatibility (PS) -43200 + (NN) -3600 + (LL) 1636
1D Compatibility (HY) -21200 + (ID) 5900
Total energy: -196139.0 ( -54.54 by residue)
QMean score : 0.373
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