Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGI--VDLSLAP-TPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN |
| 1OGD Chain:A ((26-67)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IADAGLPVPDGVLKIDLSLKPGLPAFQDTAAVLAEEMAVEKV---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13694 for 145 contacts (-94.4/contact) +
2D Compatibility (PS) -4018 + (NN) 95 + (LL) 28088
1D Compatibility (HY) -3200 + (ID) 950
Total energy: 6321.0 ( 43.59 by residue)
QMean score : 0.033
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