Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQDKKVLILYGGGSVERFGTLDKVKAALKSREVGE--FGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMT---YPVGALLQDRYAESL---LQTLIEIGPDVIKEDNHDYNTRATFM--WSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERV-WGITSGSDEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQL--DRHGLTNISERGDQTLEVSRQIYTNAL |
| 3OX4 Chain:A ((42-372)) | --------------------------------------------MNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGID-KSKKP---ALPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAY---AQFLAGMAFNNASLGYV----------HAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVAGRLKDVGVAMGLDIANLGDKEGAEATIQAVRDLAASIGIPANLTELGAKKEDVPLLADHALKDACALTN-PRQGDQ------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117850 for 2787 contacts (-42.3/contact) +
2D Compatibility (PS) -34347 + (NN) -15266 + (LL) 4820
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -181743.0 ( -65.21 by residue)
QMean score : 0.426
|
|
|