Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK |
| 2Z4G Chain:A ((3-232)) | ---DSHVHTPLCGH-AEGHPEAYLEEARAKGLKGVVFTDHSPMPPWY------DPES----RMRLEALPFYLLALERVRER-AQDLYVGIGLEADFHPGTEGFLAQLLRRY--PFDYVIGSVHYL----GAWPLDHP--DHQEEYA--WRDLKEVFRAYFQEVEKA--ARSGLFH--AIGHLDLPKKFGHRLPEEA------LLELAEPALRAVAEAGLFLDVNTAGLRRP-AKEVYPAPALLRRARELGIGLVLGSDAHRPEEVG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99343 for 1949 contacts (-51.0/contact) +
2D Compatibility (PS) -25039 + (NN) -11584 + (LL) 1568
1D Compatibility (HY) -14800 + (ID) 3650
Total energy: -152848.0 ( -78.42 by residue)
QMean score : 0.456
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