Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
1TO2 Chain:I ((1-10))
MKTEWPELVG----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3164 for 31 contacts (-102.1/contact) +
2D Compatibility (PS) -974 + (NN) -1133 + (LL) 8172
1D Compatibility (HY) -400 + (ID) 150
Total energy: 2351.0 ( 75.84 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1TO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TO2-query.scw
PDB file :
Tito_Scwrl_1TO2.pdb
: