Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPNDSYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGN----PKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRIGVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER |
| 4QRM Chain:A ((1-182)) | --------------------------------------------KFSKEQLRTFQMIHENFGRALSTYLSGRLRTFVDVEISI-DQLTYEE-FIRSVMIPSFI--VIFTGDVFEGSAIFEMRLDLFYTMLDIIMGGPGENPPNRPPTE------IETSIMRKEVTNMLTLLAQAWSDFQYFIPSIENVETNPQFVQIVPPNEIVLLVTASVSWGEFTSFINVCWPFSLLEPLLEKL-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118134 for 1335 contacts (-88.5/contact) +
2D Compatibility (PS) -19297 + (NN) -6262 + (LL) 11116
1D Compatibility (HY) -17200 + (ID) 2250
Total energy: -152027.0 ( -113.88 by residue)
QMean score : 0.605
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