Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKNLFKKPKMKDEMLEMKQNQYGARAFNMMIIIVAIVILIKAVVLEASISELWVELLLLIVGGGYYFYSVLKNNVPFMPTISLKQTIRLVFLISAIFGISVGIRNVFFLYADNMSGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNIMKKIEVENAED |
3UKX Chain:C ((6-19)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------RRRKRKREWDDDDD-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114 for 32 contacts (-3.6/contact) +
2D Compatibility (PS) -1296 + (NN) 1632 + (LL) 15036
1D Compatibility (HY) 800 + (ID) 0
Total energy: 16058.0 ( 501.81 by residue)
QMean score : 0.230
|
|
|