Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYS-TPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3Q5F Chain:A ((17-137))
----------------------RIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISR--QTCASDRRAKRIKLTEKAEPLI--AEMEEVIHKTRGEILAGISSEEIELLIKLIAKLE-------
General information:
TITO was launched using:
RESULT:
Template:
3Q5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60578 for 754 contacts (-80.3/contact) +
2D Compatibility (PS) -12795 + (NN) -5031 + (LL) 2524
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -82730.0 ( -109.72 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3Q5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q5F-query.scw
PDB file :
Tito_Scwrl_3Q5F.pdb
: