Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVSKNVKKIVITLFALIMTVGLASGFIAPIKASADTNNFTVKVEYVDADGAEIAPSDILTDYHYVSTPKDI-PGYKLREIPHN----ATGNITDTGIIVRYIYDKTIDVRYVDET--GKDLLPVVEIIN-SEAAVLETISDYTFVKKDISIDGLHIIFRYKKNISTIPDFGKPNQVTVN----YLDENKTPIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTESPQTINIIYQKKAPEQAPSMEPLPDPTVPESPQVEKSKIKKSKIETTEKRTTSKVKIAPKALKLTKVEQKKQETKDSLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRRRKE
4FAJ Chain:A ((132-264))----------------------------------------------SDGTQITASDFVAAWQRVVDPKTVSPNVELFSAIKNAKEIASGKQAKDTLAVKSIGEKTLEIELVEPTPYFTDLLSLTAYYPVQQKAIKEYGKDYGVSQKAIVTNGAF-------NLTNLEGVGTSDKWTISKNKEYWDQ----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19927 for 682 contacts (-29.2/contact) +
2D Compatibility (PS) -12805 + (NN) -4310 + (LL) 15204
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -31138.0 ( -45.66 by residue)
QMean score : 0.245

(partial model without unconserved sides chains):
PDB file : Tito_4FAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FAJ-query.scw
PDB file : Tito_Scwrl_4FAJ.pdb: