Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITNEGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVFPLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAG-IPQVPAVAVRLIDWKNYQEEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELVDAMTEAFLYDRRVVVEQGVVAREIEMGVLGNDTPVCSVPGEILPEGAVATFYDYKAKYQDNNTALIIPTEVDPEILEQMKEYAIQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPLLWQETGLPYGALIERLVDLAKERHAAKNALKYKLED |
| 3K3P Chain:A ((3-339)) | -KETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIK----------TQEFDSQPS--DKLMTNDTIIA-SQKIKPSDIYE--EEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVA--LIEGEPLESKL-AEVEEKLIYPVFVKPAN------ISKAENRTDLKQAIALALKYDSRVLIEQGVDAREIEVGILGNTDVKTTLPGEIV--------------------TMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMPGFT--SMYPLLWENMGLSYSVLIEELVSLAKE-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202630 for 2552 contacts (-79.4/contact) +
2D Compatibility (PS) -33846 + (NN) -18498 + (LL) 2604
1D Compatibility (HY) -32800 + (ID) 8000
Total energy: -293170.0 ( -114.88 by residue)
QMean score : 0.621
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