Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIVAAITAKIQKAKLPTHVEA-TRKDGFEKDSVILLEQIRTIDKQRLTDKITHLDEDLMAKVNKALEVSLGVVEF
4ME7 Chain:A ((2-115))
-IVKRGDVYFADL----------VRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQRLTDKITHLDDEMMDKVDEALQISLALID-
General information:
TITO was launched using:
RESULT:
Template:
4ME7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58046 for 706 contacts (-82.2/contact) +
2D Compatibility (PS) -11122 + (NN) -3272 + (LL) 204
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -90586.0 ( -128.31 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_4ME7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ME7-query.scw
PDB file :
Tito_Scwrl_4ME7.pdb
: