Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3EOF Chain:A ((4-191))
-----DTVKNRRTIRKYQQKDITPDLLNDLLETSFRASTMGGMQLYSVVVTRDAEKKEILSPAHFNQPMVKEAPVVLTFCADFRRFCKYCQERNA-VPGYGNLMSFLNAAMDTLLVAQTFCTLAEEAGLGICYLGTTTYNPQMIIDALHLPELVFPITTVTVGYP-AESPKQVDRLPIEGIIHEESYHDYTAEDI---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117602 for 1382 contacts (-85.1/contact) +
2D Compatibility (PS) -20691 + (NN) -10462 + (LL) 4168
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -157787.0 ( -114.17 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3EOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EOF-query.scw
PDB file :
Tito_Scwrl_3EOF.pdb
: