Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAI-RARKKI----DSTLEGKIHASLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNF------DGESSNDFIGRFGIGLLSCFIVSDEIVMISTS-QKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILGTHFQDYFLIENESG------RTFGIAYMIPHAVQMNAIRKNTVFL--NKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIAKNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEKTVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML |
| 4J0B Chain:A ((31-378)) | -----HEFQAETKKLLDIVARSLYSEKEVFIRELISNGSDALEKLRHRMITAGGDTAPMEIH--LQTDSVKGTFTIQDTGVGMNKEDLVSNLGTIARS--GSKAFLDALQNQAEASSSIIGQFGVGFYSAFMVADKVEVYSQSAEADAPGYKWSSDGSGVFEV--AEASGVRQGTKIVLHLK---DDCKEFSSEDRVKEVVTKYSNFVSFPIFLNGRRLNTLQALWMMEPKD------ISEWQHEEFYRYVAQAYDKPRYTLHYRADAPLNIRSIFYVPEMKP--------MGSSVALYSRKILIQTKATDILPKWLRFLRGVVDSEDIPLNLSRE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97271 for 2216 contacts (-43.9/contact) +
2D Compatibility (PS) -30556 + (NN) -6527 + (LL) 25984
1D Compatibility (HY) -18800 + (ID) 4250
Total energy: -131420.0 ( -59.31 by residue)
QMean score : 0.341
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