Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDRAKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKAGKLSGLAHCIAFANKDFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVENYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEERAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF
3OIF Chain:A ((1-255))
MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR--PMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI---
General information:
TITO was launched using:
RESULT:
Template:
3OIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181817 for 2198 contacts (-82.7/contact) +
2D Compatibility (PS) -27578 + (NN) -5347 + (LL) 496
1D Compatibility (HY) -28000 + (ID) 7900
Total energy: -250146.0 ( -113.81 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_3OIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OIF-query.scw
PDB file :
Tito_Scwrl_3OIF.pdb
: