Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKLLEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
| 3GIF Chain:A ((26-216)) | --------------------------------------------------------------------------------------------------------------------------------------------------EERQRIARDLEDTLGQKL-SLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELI--NIKQILEAADIMFIYEEEKWPENISLLN--ENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGE-------HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIPNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59822 for 1259 contacts (-47.5/contact) +
2D Compatibility (PS) -20952 + (NN) -13350 + (LL) 13432
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -90292.0 ( -71.72 by residue)
QMean score : 0.471
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