Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHV-HDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2OS1 Chain:A ((1-179))
MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGGVGLAAPQLDISKRIIAVHVP-----SL-STVMYNPKILSHSVQDVCLGEGEGCLSVDRDVPGYVVRHNKITVSYFDMAGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFAL--------
General information:
TITO was launched using:
RESULT:
Template:
2OS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100577 for 1330 contacts (-75.6/contact) +
2D Compatibility (PS) -18098 + (NN) -7461 + (LL) 64
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -152322.0 ( -114.53 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2OS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS1-query.scw
PDB file :
Tito_Scwrl_2OS1.pdb
: