Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID-DQAKT--SVQDFDYASYYHADVTIHSGTFNECRNADIVVFF----QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFE--NKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 4M1Q Chain:A ((25-323)) | --TKTSRVVIIGTGAVGSSYAFSMINQNVTDEMVLIDLDKRKTEGDAMDLNHGIPFGAPTKVWAGDYGDCKSADIVVITAGAAQKPGETRLDLVEKNANIFKGIVDQVMGSGFNGIFIIATNPVDVLAYATWKFSGLPKERVIGSGTILDTARFRFLLSEYFDIDVRNIHGYIMGEHGDTELPVWSQTRIGSEPISRYMDKYKPDGSNKDLD---EIFVNVRDAAYHIIERKGAT-HYAIAMGLARLTKAILRNEQSILTVSTLMEGEYDLDD-VYIGVPAIVSQKGVERAIEIDLNDEEMKKLHH-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244072 for 2414 contacts (-101.1/contact) +
2D Compatibility (PS) -31725 + (NN) -14012 + (LL) 1708
1D Compatibility (HY) -23200 + (ID) 4550
Total energy: -315851.0 ( -130.84 by residue)
QMean score : 0.681
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