Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKDFEALTLFINQYKVEHVINPTKEVSASNPESYLANKNGYVITLDISIKN--NSKKDKMYKADQISLLGASKSVGGSLDNFIPSGFHLIGSSSDPYNFTAGKTARGLLTFTMDEATYNDLAKDSQIGVPDPSRFDSSSTKGSSQDNVVAPFPIK |
| 3PN5 Chain:A ((7-62)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------PDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNPAG--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3921 for 280 contacts (14.0/contact) +
2D Compatibility (PS) -5628 + (NN) -534 + (LL) 9668
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 3677.0 ( 13.13 by residue)
QMean score : -0.116
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