Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKE-HNLTVTEWDKDSV--DIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVI-RTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADF----IRFVIEKNPAYGIYQFSNSGTATWFEFATEIL---KDKDVT-----VNPCTSDEFPQKAERPKTSIMSLEKVEK-LGFNIPTWQDALVRFKK |
| 1KC1 Chain:A ((1-289)) | MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESE-PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK-ALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRM-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93940 for 2212 contacts (-42.5/contact) +
2D Compatibility (PS) -29922 + (NN) -13714 + (LL) 496
1D Compatibility (HY) -17200 + (ID) 5150
Total energy: -159430.0 ( -72.08 by residue)
QMean score : 0.471
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