Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEWTIIGWLLKFVKPLRGKMILAILLGIISN-LSVIMISLIG-TYGIIAVILQQPLNPYKWLFVMVACGVVRGLARYLEQ----YLNHDIAFRLLAIIRERIFATLRKLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIATVGFLASYDVGLAIILLVGQIMVGVVLPMISYKRNKKIGTAYQQAFVGLNQMVMENIASLQDIFQFKLGEERLRKLETQGEKLNRQYKKRIRQGSELQILGEWV-----LIGTATIILVLGSLSQLPLETVL-IGTVLSLSSFGSVLA--LNALGTA---LLTTFASGKRLYA---LTEEKPVVLFNGQLELSDFESA-ELDKVSFSHDGKQPLLNELSLALPKGKWLGIGGESGSGKSTLVKLLMRYWDPD-GQVKLNNNELPKITESSLHRLEGVMEQRTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWIETLPEGYETIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILNTLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK |
| 3QF4 Chain:B ((28-572)) | ---------LLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLP-RYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRL----RKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTL-SIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKV-------GTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD---PDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220468 for 3686 contacts (-59.8/contact) +
2D Compatibility (PS) -54425 + (NN) -13861 + (LL) 3140
1D Compatibility (HY) -50000 + (ID) 7600
Total energy: -343214.0 ( -93.11 by residue)
QMean score : 0.375
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