Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL
4P2S Chain:A ((11-98))
--EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKG-
General information:
TITO was launched using:
RESULT:
Template:
4P2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43942 for 678 contacts (-64.8/contact) +
2D Compatibility (PS) -9815 + (NN) -4056 + (LL) 304
1D Compatibility (HY) -10400 + (ID) 3650
Total energy: -71559.0 ( -105.54 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4P2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P2S-query.scw
PDB file :
Tito_Scwrl_4P2S.pdb
: