Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYIKNPAKIEEKSFEIIQQIIDDIRPDYTFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCYVSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMVESGQLQADAVVAVPVGFVGAAECKEEILETD--IPAIVARGRKGGSNLAAAIINAILITM
1I1H Chain:A ((14-214))
-DYIRDGNAIYERSFAIIRAEADLSR----FSEE-EADLAVRMVHACGSVEATRQFVFSPDFVSSARAALKAGAPILCDAEMVAHGVTRARLPA-GNEVICTLRDPRTPALAAEIGNTRSAAALKLWSERLAGSVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGRLGGSAMTAAALNSL----
General information:
TITO was launched using:
RESULT:
Template:
1I1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139302 for 1762 contacts (-79.1/contact) +
2D Compatibility (PS) -21944 + (NN) -10041 + (LL) 1128
1D Compatibility (HY) -9600 + (ID) 3400
Total energy: -183159.0 ( -103.95 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_1I1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I1H-query.scw
PDB file :
Tito_Scwrl_1I1H.pdb
: