Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTSNKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP---DFDSIIVSQPLLDSMEDYEKAIEAIRHQMPP-LKEQEALILMGHGSKHHAFSAYACLDHML--LNEPIYLCAVESYPGLDQVIERLQQADIKKAHLMPFMLVAGDHATNDMASDEENSWKSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG
2XVZ Chain:A ((9-269))
-KTGILLVAFGTSVEEAR-PALDKMGDRVRAAHPDIPVRWAYTAKMIRAKLRA-EGIAAPSPAEALAGMAEEGFTHVAVQSLHTIPGEEFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPADRKPGEPVVFMGHGTPHPADICYPGLQYYLWRLDPDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHLDDALARLN---
General information:
TITO was launched using:
RESULT:
Template:
2XVZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203119 for 2186 contacts (-92.9/contact) +
2D Compatibility (PS) -28075 + (NN) -13134 + (LL) 392
1D Compatibility (HY) -17200 + (ID) 4500
Total energy: -265636.0 ( -121.52 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2XVZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XVZ-query.scw
PDB file :
Tito_Scwrl_2XVZ.pdb
: