Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGLDIGTAKITPEEMDEIKHYLIDVTDPSEPFTAAKFQTETRKWIETIHQAGKLPIIVGGTGLYIQSVFYDYDFGNVSEDKAYRAELEQLNKTLLWQMLEQQ----DPESAAQIHENNKRRVIRALEVMHLTGKPFSE----------YQVHNVLNDTYKPLFLGLDLDRALLYERINQRVNLMFEEGLVTEAKKLY---DQHLVDVPAVCGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRNRMEIDWIQAGVSTTEAEALNKAETFLSVK |
| 3FOZ Chain:A ((12-295)) | -----AIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLS-PLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQ---------FAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLH-TDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103701 for 2022 contacts (-51.3/contact) +
2D Compatibility (PS) -29529 + (NN) -16302 + (LL) 2892
1D Compatibility (HY) -18400 + (ID) 5450
Total energy: -170490.0 ( -84.32 by residue)
QMean score : 0.526
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