Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLFRQDENILNSELAEDLPIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL
3WYI Chain:A ((17-247))
---------------EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQ------
General information:
TITO was launched using:
RESULT:
Template:
3WYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101248 for 1838 contacts (-55.1/contact) +
2D Compatibility (PS) -25046 + (NN) -10357 + (LL) 1380
1D Compatibility (HY) -24800 + (ID) 6000
Total energy: -166071.0 ( -90.35 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3WYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WYI-query.scw
PDB file :
Tito_Scwrl_3WYI.pdb
: