Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKIFAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKDQYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRSFNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAGLKKGDEVLSINGKETKSWTDIVQNVSENPGKTLDFKIERDGKTQDIDVKPATQKENGKDVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYTSTQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKEGIIHFAGFALLMVLMILVTWNDIQRAFF |
2ZPM Chain:A ((224-306)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVLENVQPNSAAS-AGLQAGDRIV-VDGQPLTQWVTFVMLVRDNPG-SLALEIERQGSPLSLTLIPES-PGNG-AIGFVGIE---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7348 for 513 contacts (-14.3/contact) +
2D Compatibility (PS) -8072 + (NN) 782 + (LL) 25464
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: 2576.0 ( 5.02 by residue)
QMean score : 0.611
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