Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQCYNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQIDGNKLSFSNGKDLITYSKYNDLVRRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP |
| 3AFV Chain:A ((370-408)) | -QQINWANNANFPFSKPITPGIEPIIGQTTPRTVGGLDPL------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1636 for 194 contacts (-8.4/contact) +
2D Compatibility (PS) -3644 + (NN) 2675 + (LL) 8184
1D Compatibility (HY) 0 + (ID) 700
Total energy: 4879.0 ( 25.15 by residue)
QMean score : -0.036
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