Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
1OQW Chain:A ((1-58))
-------------FTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALASVNPLKTTVEEALSRGWSVK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11283 for 231 contacts (-48.8/contact) +
2D Compatibility (PS) -6029 + (NN) -2828 + (LL) 1692
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -22648.0 ( -98.04 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_1OQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OQW-query.scw
PDB file :
Tito_Scwrl_1OQW.pdb
: