Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKWNVYLTKGEYEPWWFFEEWETSIQEDFSFSDKEAAFLKYQELAEALL-----------SNYPKHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFFEGEVYQPTPEEKETIFKRVLTFA
4NST Chain:B ((57-148))
-----------------------------FIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETP--KKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERIL---
General information:
TITO was launched using:
RESULT:
Template:
4NST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 27831 for 598 contacts (46.5/contact) +
2D Compatibility (PS) -8397 + (NN) -898 + (LL) 2860
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: 14696.0 ( 24.58 by residue)
QMean score : 0.148
(partial model without unconserved sides chains):
PDB file :
Tito_4NST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NST-query.scw
PDB file :
Tito_Scwrl_4NST.pdb
: