Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNLQTKFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHL-DLLQTIERNNTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAEKNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSCGSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVKIIGEDK |
2GQT Chain:A ((11-255)) | ------------------LKDYTTLGVGGPAELW----TVETREEL---KRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDLKGW---VGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCPEELGFGYRKSHLPPGG-IVTRVRLKLKERPKEEILRRMAEVDRARKG-QP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQ---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111230 for 1969 contacts (-56.5/contact) +
2D Compatibility (PS) -25965 + (NN) -6278 + (LL) 4828
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -157745.0 ( -80.11 by residue)
QMean score : 0.457
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