Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQ----LVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER
1XM5 Chain:A ((4-147))
-VILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEE-------SEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEM------------SLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYE-
General information:
TITO was launched using:
RESULT:
Template:
1XM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37475 for 998 contacts (-37.6/contact) +
2D Compatibility (PS) -15140 + (NN) -7407 + (LL) 1464
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -71058.0 ( -71.20 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1XM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XM5-query.scw
PDB file :
Tito_Scwrl_1XM5.pdb
: