Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYEYFPGFYDRLMDSELYDEWLEFSADFIGDAPKK---VLDLACGTAEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEIDLPIIEQDMSKLALK-QTFDVVTCFCDSLNYLETEQALEATIQAVSAHLEPNGLFLFDVHSVFKIEQGFKDYSYGDSDEEISTIWNSFPGEHPHSIEHELTFYILGEDDTYNRVDELHKERTYPIATYENLLKKFGFTKIDIYADFSHEKPNKTSERIFFAARK
1VE3 Chain:A ((7-153))
--YRVFPTYTD--INSQEYRSRIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYV-IFIDSIVHFEPLE-LNQVFKEVRRVLKPSGKFI------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1VE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94869 for 980 contacts (-96.8/contact) +
2D Compatibility (PS) -14383 + (NN) -8763 + (LL) 6964
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -124951.0 ( -127.50 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1VE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VE3-query.scw
PDB file :
Tito_Scwrl_1VE3.pdb
: