Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVM--------------------ADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVI------DMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAEENLNEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD |
| 2DBY Chain:A ((4-145)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------VGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERVPPVVPTHVEFVDIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDP----------LEDAEVVETELLLADLATLER---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41442 for 613 contacts (-67.6/contact) +
2D Compatibility (PS) -11223 + (NN) -3119 + (LL) 19392
1D Compatibility (HY) -8000 + (ID) 2300
Total energy: -46692.0 ( -76.17 by residue)
QMean score : 0.212
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