Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQMVDLINQLRP-DYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL-----EKEDIEPP---KLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDPVAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK
3R9I Chain:A ((2-258))
-ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEE----------------
General information:
TITO was launched using:
RESULT:
Template:
3R9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166965 for 2145 contacts (-77.8/contact) +
2D Compatibility (PS) -26156 + (NN) -3451 + (LL) 1524
1D Compatibility (HY) -23600 + (ID) 5700
Total energy: -224348.0 ( -104.59 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3R9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9I-query.scw
PDB file :
Tito_Scwrl_3R9I.pdb
: