Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHAENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVGA--NPSEIGNKVAEDLLSEGADTIIKELRNV
1GTK Chain:A ((8-308))------IATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAAL---PPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYN-


General information:
TITO was launched using:
RESULT:

Template: 1GTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118067 for 2385 contacts (-49.5/contact) +
2D Compatibility (PS) -30905 + (NN) -17173 + (LL) 1908
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -194837.0 ( -81.69 by residue)
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_1GTK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GTK-query.scw
PDB file : Tito_Scwrl_1GTK.pdb: