Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKNIDVLQNWLKDQGAEVGFLTDPENIA-----YFSGYHSEPHERVLGLAVFSDSEPFLFTPA-----------LEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKF---AIEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGDLVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEIDLTARNIIREAGFGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPGVAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE |
2ZSG Chain:A ((7-359)) | -------LIQLISEEGIDAFLIMNIENSARASSVYFSGFTGS-----FSIILISENTRLLITDSRYTVQAKQETDFEVREV---DFI------------------DVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQGCEILTTLPRSIFVV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145276 for 2765 contacts (-52.5/contact) +
2D Compatibility (PS) -36359 + (NN) -14336 + (LL) 1276
1D Compatibility (HY) -29600 + (ID) 6350
Total energy: -230645.0 ( -83.42 by residue)
QMean score : 0.515
|
|
|