Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTL--LHQDGLAN-LLVDP---VDVVISDLPVGY-YP---DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
1AQI Chain:A ((22-185)) | -----------------------------------------------------------------------------------------------ETPPEVVDFMVS-----LAEAPRGGRVLEPACAHGPFL---------RAFREAHGTGYR---------FVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIV--KAVKDLYKKAFSTWKGKYNLYGAFL--EKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81672 for 1048 contacts (-77.9/contact) +
2D Compatibility (PS) -14998 + (NN) -2082 + (LL) 16604
1D Compatibility (HY) -15600 + (ID) 2050
Total energy: -99798.0 ( -95.23 by residue)
QMean score : 0.475
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