Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVIISIGGDGAFLKSVRETGFRQDCL-YAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLVRRYPTI-----YGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTGSTAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGNNEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL |
2I1W Chain:A ((27-262)) | -------------------------------YDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIH-TGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKY----KEATYLALNESTVKSS---PFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVF-PKHHV---VSLQPVNDKDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85306 for 1664 contacts (-51.3/contact) +
2D Compatibility (PS) -24172 + (NN) -4893 + (LL) 3768
1D Compatibility (HY) -19600 + (ID) 4000
Total energy: -134203.0 ( -80.65 by residue)
QMean score : 0.345
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