Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARYTGPSWKVSRRLGISLSGTGKELERRPYAPGQHGPTQRKKISEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLRGKHGENFMILLEQRLDNIVYRLGLARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSFVPEYVTFDAEKLTGSLNRLPERSELAAEINEAFIVEFYSR
1C06 Chain:A ((2-159))
------------------------------------------KLSEYGLQLQEKQKLRHMYGVNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALEANNYIPDYLSFDPEKMEGTYTRLPERSELPAEINEALIVEFYSR
General information:
TITO was launched using:
RESULT:
Template:
1C06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59289 for 1149 contacts (-51.6/contact) +
2D Compatibility (PS) -16713 + (NN) -2850 + (LL) 1496
1D Compatibility (HY) -18000 + (ID) 5600
Total energy: -100956.0 ( -87.86 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1C06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C06-query.scw
PDB file :
Tito_Scwrl_1C06.pdb
: