Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKA--LEEKQIPI-MTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSV-IRYHKFLGQL-IDGYTSIAITGSHGKTSTTGLLSHVVGAIR--PTSYL--IGDGTGSGT--KDAEYFALEACEYQRHFLAYKPTYAIMTNIDWDH-PDYFKSVDDVFNAFETLGKQVKKAVFALGDDAELRKLTLDIPIIYFGFGEEN-EFQAKNVIKETTGTKFDVYHREEFLSSFEIPAYGDHNVLNALSVIALCDYEGLPVEDVKNELKTFEGVKRRFSIT---EKGNQVLVDDYAHHPSEIRATVNAARQKYPDKKVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKGNHIIKEEHTEELLKYPEAVI--------LFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN |
| 1J6U Chain:A ((5-431)) | -----FVGIGGIGMSAVALHEFSNGNDVYGSNIEE---TERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRDDNPEIVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHGNYEKGNGPVVYELDESEEFFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTDLVVTFAEDE-----LTSHLGDVTFGVKKGTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGF--HNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHR--------GNFAKALQLADEVVVTEVYD---------SGKMIWDSLKS--LGKEAYFVEKLPELEKVISVSENTVFLFVGAGDI--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 33574 for 3087 contacts (10.9/contact) +
2D Compatibility (PS) -38144 + (NN) 11515 + (LL) 4628
1D Compatibility (HY) 8400 + (ID) 1700
Total energy: 18273.0 ( 5.92 by residue)
QMean score : 0.093
|
|
|