Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFR-TAEDVARVSQKYDAVLVGEALMREATPEVAAKSLKVTR
3T78 Chain:A ((52-258))
------------------------------------------IGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTL--DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADL----
General information:
TITO was launched using:
RESULT:
Template:
3T78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123283 for 1774 contacts (-69.5/contact) +
2D Compatibility (PS) -22200 + (NN) -8838 + (LL) 5028
1D Compatibility (HY) -15200 + (ID) 4300
Total energy: -168793.0 ( -95.15 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3T78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T78-query.scw
PDB file :
Tito_Scwrl_3T78.pdb
: