Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDN---YDSFTFNLEQYLAEFSEVVVKRNDAADLIKIAAL-ADGIVLSPGPGKPSDAGLLEEVVAKFAK-EKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI
2D7J Chain:A ((2-182))
MIVIMDNGGQYVHRIWRTLRYLGVETKII---PNTTPLEEIKAMNPKGIIFSGGPSL-ENTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEKAEYSLVEIEIIDEDEIFKGLPKRLKVWESH--MDEVKELPPKFKILA-RSETCPIEAMKHEELPIYGVQFHPEVAHTEKGEEILRNF------------------
General information:
TITO was launched using:
RESULT:
Template:
2D7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74447 for 1497 contacts (-49.7/contact) +
2D Compatibility (PS) -18394 + (NN) -2867 + (LL) 1680
1D Compatibility (HY) -15600 + (ID) 3000
Total energy: -112628.0 ( -75.24 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2D7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D7J-query.scw
PDB file :
Tito_Scwrl_2D7J.pdb
: