Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYTELIAN-----ELGTK--AFYESIKDNRILEMFYDDPKRWAFALQIYFLNTRFRSIKAALTD-QNNVL--DRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
2A2Z Chain:A ((23-214))
----RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLEL--DGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2A2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82958 for 1264 contacts (-65.6/contact) +
2D Compatibility (PS) -18927 + (NN) -6301 + (LL) 1956
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -122180.0 ( -96.66 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_2A2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2Z-query.scw
PDB file :
Tito_Scwrl_2A2Z.pdb
: