Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNENLITITGLTKKYRKRK--PLNDINLSLQKGKIIGLLGPNGAGKTTLLNAISGLLKPTSGTIN-----LAENSKIAYLPSEDFLPNMVICDYFRIYHSF-------FPDFDQEKAKQMIRSFGINIKENTKY-------------LSKGNAAKVMLALILCRDVDLYLLDEPFSEIDLISRDD---LIKSIATFLKEDATLVVTTHLIQDMEMMFDEIIFLKRGKIIEQIDTETLREEYRKSVMDYYREVFGHA
1OXT Chain:A ((4-228))-----IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKL-IVPPEDRKIGMVFQTW-ALYPNLTAFENIAFPLTNMKMSKEEIRK---RVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRL--GVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDL-------------------


General information:
TITO was launched using:
RESULT:

Template: 1OXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127953 for 1446 contacts (-88.5/contact) +
2D Compatibility (PS) -20662 + (NN) -5045 + (LL) 2524
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -169486.0 ( -117.21 by residue)
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_1OXT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXT-query.scw
PDB file : Tito_Scwrl_1OXT.pdb: