Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKNQISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESGLMRVSQNKYSPDNYLFQEGQYLDKETLEKWLDRKSDKNPNGLNPASNGNGENRKPIYLAHILEQDYLKQTDKDTVALGGISIALAMNSVDYYQKEKYGDTYEQPISDSELLAQGKEMSATVLNRIRQTKGLENVPVTIAIYKQGARDAVAPGNYIAYATA--NGDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNFLNFKKAIEDYYP-NFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQHIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD |
3N2Q Chain:A ((73-333)) | -----------------------------------------------------------------------SKLDLAEYENGLINIATQQFDTESHVLQLNQYIPEKLIDELVAKV------------------EAPV-LTNIIEQDYFGK---NELSLSGVMIGLAMSS---------------SVSNEEAMSKGTEVAKQLIEAINKNDKYNKSPITFAIFKQESTSSLKNGTYIASATVQKNDTNLGNWSTIDEKSYSYPSDEFTQAHGEDNTKINNFAKEIKGF-NGDFIPVNAKVSYKKDQMDTLNMNIVIKYNGKTELMALTQLAAQGMLDKLPKDAKVQLQIKSESKIEAVIIKEKNSD-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1274 for 1758 contacts (-0.7/contact) +
2D Compatibility (PS) -25288 + (NN) -1309 + (LL) 5236
1D Compatibility (HY) 3600 + (ID) 1400
Total energy: -20435.0 ( -11.62 by residue)
QMean score : 0.184
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