Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQVTEGGDKFAIELAALFHDYNDS--KLT--EDPLQATEIITTWLREKEIPEDVISKIIRIIQAVSFKNGKNPIQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQHFYDKLLLIQTQ-LKTKTGRELAGEKQIIMQDFIHALEKELKI
2PQ7 Chain:A ((32-210))
-----------------------AHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLPTMGFDISFVAEVSKAIRSHR-----TP---TSLTGKILQDADRLDAIGAVAIARVFSY------------------------------PETFWTETARKMAEDRYSFVVEFV---------
General information:
TITO was launched using:
RESULT:
Template:
2PQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26504 for 1016 contacts (-26.1/contact) +
2D Compatibility (PS) -14461 + (NN) -5429 + (LL) 5944
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -50950.0 ( -50.15 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ7-query.scw
PDB file :
Tito_Scwrl_2PQ7.pdb
: