Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQYAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVNDIASFNTLADSAKKALAK |
1NWY Chain:O ((2-116)) | -PRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFINGLKRANIDLNRKVLADIAAREPEAFKALVDASRNA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 757893 for 5886 contacts (128.8/contact) +
2D Compatibility (PS) -11399 + (NN) 0 + (LL) 248
1D Compatibility (HY) 8400 + (ID) 550
Total energy: 754592.0 ( 128.20 by residue)
QMean score : ?
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