Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK
2CRQ Chain:A ((14-85))
-----------------------------------------------------------------------------------MTKELVFSSNIGQHDLDTKSKQIQQWIEKKYHVQVTIKRRKDAEQSEEETEEIFNQILQTMPDIATFSSRPK----------------
General information:
TITO was launched using:
RESULT:
Template:
2CRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12313 for 409 contacts (-30.1/contact) +
2D Compatibility (PS) -7691 + (NN) -2849 + (LL) 7820
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -20033.0 ( -48.98 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2CRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CRQ-query.scw
PDB file :
Tito_Scwrl_2CRQ.pdb
: