Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGRMGDVIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTRRIYRNGDSEFLINKENCRLKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSIFEEAAGVLKYKHRKKQAENKLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQQEELEKYEVTLLASEISSLTEKLAEVRKEFGENQTVLIKLREELHAEEAVISREKQALNETDIALDKLQERLLVETEKLEQLEGERNLQLERKKHSSENEQVYAETLAVITEKITALEEQKEVLSSSKLEKETALEIAIKSKKVLEATLAKYDDLSEEAIENRKSDYIDLRHTQTTINNDLGYIERQIGQITSRIDKLDLENSHHVDDRKDMLAQIETTKTHLTKIQSELTEQMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLEELADDYAGFFQGVREVLKAKKEIPGILGALVELVEIPAKYQQAMETALGASAQNVVVEDDRVAREAISFLKKTKSGRATFLPLSTIQPRELPAATKNALSNQPAFIALASEVISFDEKVSPVILNALGTTILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSMTGGATKGGKSSILTRKHELGQLAEKIAELNESTREMESAVQLAKDSMAKKREELEETRVIGENLRLQEKELLGKLDRETENLERFNKQLQLYDIEKADGSEELNKLLERKETLLQEQVEIAKQIEVTDEEIKAMTSSSKALESKRAADLESLSSLKAQIAAKREQLQSATEAVERVTTTLHENYEQKEAAEQKLASLKTNLTSVHTSEETARKSIEELRKDKTETSEKLTQTRQTRAELQEKLELLEAELTQKNNQISFYMEQKNNAEISIGRLEVDIANRIDRLQEAYLLTPEQAEEKILSEVNTEQARSKVRLLKRSIDELGIVNIGAIEEFERIQERFDFLTGQQADLLAAKETLFKVMDEMDEEMKIRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQPPGKKLQNLSLRSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQFESGTQFIVITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK |
1GXL Chain:A ((479-679)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LREIQFEKEMIERDMREYRGFSRAVRAVFEEKERFPGLVDVVSNLIEVDEKYSLAVSVLLGGTAQNIVVRNVDTAKAIVEFLKQNEAGRVTILPLDLIDG---SFNRISGLENERGFVGYAVDLVKFPSDLEVLGGFLFGNSVVVETLDDAIRMKKKYRLNTRIATLDGELISGRGAITGGREE-RSSNVFERRIKLKHLEQEME------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109366 for 1456 contacts (-75.1/contact) +
2D Compatibility (PS) -20886 + (NN) -4863 + (LL) 83456
1D Compatibility (HY) -18000 + (ID) 2800
Total energy: -72459.0 ( -49.77 by residue)
QMean score : 0.548
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