Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGMVM
3OSU Chain:A ((5-243))
-----KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG---
General information:
TITO was launched using:
RESULT:
Template:
3OSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103387 for 2082 contacts (-49.7/contact) +
2D Compatibility (PS) -26062 + (NN) -6986 + (LL) 992
1D Compatibility (HY) -22800 + (ID) 7450
Total energy: -165693.0 ( -79.58 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3OSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSU-query.scw
PDB file :
Tito_Scwrl_3OSU.pdb
: